Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF00181 across 1 genomes (restricted to HOLIG) · 48 ms.

Species with hits:← all speciesHOLIG 7
SpeciesGene IDPfam termMatchSourceBrowser
HOLIGHOLI00014.G9540PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI00073.G39125PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI00002.G19978PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI00823.G35957PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI04440.G32865PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI01529.G35400PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse
HOLIGHOLI00001.G52338PF00181Ribosomal Proteins L2, RNA binding domainInterproscanJBrowse

TOP