Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF00482 across 1 genomes (restricted to Cassiopea xamachana) · 2 ms.

Species with hits:← all species Cassiopea xamachana 11

Species	Gene ID	Pfam term	Match	Source	Browser
Cassiopea xamachana	Cxam_g2273.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g9742.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g9742.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g7654.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g16757.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g16757.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g5417.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g5417.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g2272.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g25354.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g7653.t1	PF00482	Type II secretion system (T2SS), protein F	Interproscan	JBrowse