Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF00562 across 1 genomes (restricted to LPERT) · 65 ms.

Species with hits:← all speciesLPERT 6
SpeciesGene IDPfam termMatchSourceBrowser
LPERTOS493_016129-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
LPERTOS493_004563-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
LPERTOS493_039887-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
LPERTOS493_012146-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
LPERTOS493_012147-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
LPERTOS493_040182-T1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse

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