Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01564 across 1 genomes (restricted to Lophelia pertusa) · 9 ms.

Species with hits:← all speciesLophelia pertusa 8
SpeciesGene IDPfam termMatchSourceBrowser
Lophelia pertusaOS493_000153-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_000139-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_003777-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_002752-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_002750-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_035414-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_000154-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse
Lophelia pertusaOS493_002751-T1PF01564Spermine/spermidine synthase domainInterproscanJBrowse

TOP