Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF03166 across 1 genomes (restricted to Astrangia poculata) · 9 ms.

Species with hits:← all speciesAstrangia poculata 8
SpeciesGene IDPfam termMatchSourceBrowser
Astrangia poculataevm.model.Ap5.2141PF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap2.3987PF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap2.3455PF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap5.2140_evm.model.Ap5.2142.1.5f168e1aPF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap9.2529PF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap5.2140_evm.model.Ap5.2142.2.5f168e1aPF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap5.2140_evm.model.Ap5.2142PF03166MH2 domainInterproscanJBrowse
Astrangia poculataevm.model.Ap2.3986PF03166MH2 domainInterproscanJBrowse

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