Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF04055 across 1 genomes (restricted to Astrangia poculata) · 9 ms.

Species with hits:← all speciesAstrangia poculata 8
SpeciesGene IDPfam termMatchSourceBrowser
Astrangia poculataevm.model.Ap3.33PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap3.328PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap6.1143PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap5.2287PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap11.622PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap6.1140PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap11.56PF04055Radical SAM superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap12.242PF04055Radical SAM superfamilyInterproscanJBrowse

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