Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF04561 across 1 genomes (restricted to HOLIG) · 52 ms.

Species with hits:← all speciesHOLIG 10
SpeciesGene IDPfam termMatchSourceBrowser
HOLIGHOLI00076.G48506PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI02939.G4325PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00823.G36002PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00823.G36002PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00014.G9369PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00014.G9369PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00117.G2616PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00459.G54308PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00001.G52346PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
HOLIGHOLI00001.G52346PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse

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