Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF04607 across 1 genomes (restricted to HOLIG) · 60 ms.

Species with hits:← all speciesHOLIG 16
SpeciesGene IDPfam termMatchSourceBrowser
HOLIGHOLI00003.G5359PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00003.G5359PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00049.G352PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00049.G352PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00002.G18087PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00002.G19604PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00001.G51577PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00001.G52953PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00003.G5358PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00003.G5358PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00049.G353PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00264.G3159PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00353.G43139PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00150.G2417PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00299.G46842PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse
HOLIGHOLI00049.G355PF04607Region found in RelA / SpoT proteinsInterproscanJBrowse

TOP