Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF04888 across 148 genomes · 30 ms.

Species with hits:Diadumene lineata 2Aurelia aurita complex sp. Pacific 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1747.g2.t1PF04888Secretion system effector C (SseC) like family InterproscanJBrowse
Diadumene lineataENSDLIP00000024213.1PF04888Secretion system effector C (SseC) like family InterproscanJBrowse
Diadumene lineataENSDLIP00000024215.1PF04888Secretion system effector C (SseC) like family InterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023249.1PF04888Secretion system effector C (SseC) like family InterproscanJBrowse

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