Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04963 across 1 genomes (restricted to Montipora grisea) · 8 ms.

Species with hits:← all species Montipora grisea 5

Species	Gene ID	Pfam term	Match	Source	Browser
Montipora grisea	ANN32484-RA	PF04963	Sigma-54 factor, core binding domain	Interproscan	JBrowse
Montipora grisea	ANN39354-RA	PF04963	Sigma-54 factor, core binding domain	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	PF04963	Sigma-54 factor, core binding domain	Interproscan	JBrowse
Montipora grisea	ANN21015-RA	PF04963	Sigma-54 factor, core binding domain	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	PF04963	Sigma-54 factor, core binding domain	Interproscan	JBrowse