Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF11938 across 1 genomes (restricted to Lophelia pertusa) · 0 ms.

Species with hits:← all speciesLophelia pertusa 6
SpeciesGene IDPfam termMatchSourceBrowser
Lophelia pertusaOS493_027578-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse
Lophelia pertusaOS493_002091-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse
Lophelia pertusaOS493_015183-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse
Lophelia pertusaOS493_040132-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse
Lophelia pertusaOS493_034297-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse
Lophelia pertusaOS493_027579-T1PF11938TLR4 regulator and MIR-interacting MSAPInterproscanJBrowse

TOP