Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF12017 across 1 genomes (restricted to AALAT) · 33 ms.

Species with hits:← all speciesAALAT 7
SpeciesGene IDPfam termMatchSourceBrowser
AALATAala_g2624.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g1946.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g692.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g726.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g1519.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g1703.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse
AALATAala_g899.t1PF12017Transposable element P transposase-like, HTH domainInterproscanJBrowse

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