Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | ASM893075v2 |
|---|---|
| Assembly level | Scaffold |
| Assembled by | GCA_008930755.2 |
| Genome size | 1247.88 |
| Scaffolds | 2005718 |
| Contigs | 2012777 |
| Scaffold N50 | 919 |
| Contig N50 | 918 |
| GC content | 38 |
| BUSCO | 18.30% |
| Protein-coding genes | 66,156 |
| Proteins | 66,156 |
| Chromosomes | - |
| WGS accession | PUGI02 |
| BioProject | PRJNA421156 |
| Submitter | IRIDIAN GENOMES |
| Year | 2022 |
| Reference | Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa) GigaScience [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 18:01). If a data type is listed as unavailable for Alatina alata, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
