Species Overview — Morbakka virulenta

CnidoSite currently holds 7 of the 15 data types it covers for Morbakka virulenta. Each entry below links straight into the corresponding module already filtered to this species; the greyed-out entries have no data for it in the current release. Use the box underneath to open the same overview for any other species.

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Open Genome →
Full assembly record · BUSCO · TFs / Ubs · Pan-geneset

Gene annotation

✓ 28,984 records

Predicted gene models with CDS / transcript / protein sequences

Open Gene models →

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Open Function →
InterPro by gene ID · Pfam by gene ID · GO by gene ID · KEGG by gene ID

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Open Gene family →
Orthogroup browser

Bulk transcriptome

✓ 2 records

RNA-seq samples with expression values (TPM)

Open Transcriptome →
Dynamic Expression View

Co-expression network

— not available

Positive / negative co-expression edges

Open Co-expression anyway →

Single-cell

— not available

scRNA-seq datasets, cell atlas and marker genes

Open Single-cell anyway →

Proteome

— not available

Mass-spectrometry proteomics samples

Open Proteome anyway →

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Open Epigenome anyway →

Metagenome

— not available

Host-associated metagenomic samples

Open Metagenome anyway →

Phenotype

— not available

Trait measurements with geo-referencing

Open Phenotype anyway →

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Open Paleobiology anyway →

Mitogenome

✓ 1 record

Mitochondrial genome record and gene annotations

Open Mitogenome →

Transposable elements

— not available

Repeat annotation of assembled genomes

Open TE anyway →

Genome browser

✓ available

Interactive JBrowse track for the assembly

Open JBrowse →

Assembly record

Assembly

Assembly name
MVIv1
Assembly level
Scaffold
Assembly accession
GCA_003991215.1
Assembled by
Okinawa Institute of Science and Technology Graduate University
Year
2019

Genome statistics

Genome size
907.49 Mb
GC content
35.5%
Scaffolds
4,538
Scaffold N50
2.17 Mb
Contigs
55,386
Contig N50
30.8 kb

Annotation

BUSCO
Complete, single-copy 73.1%Complete, duplicated 1.0%Fragmented 9.7%Missing 16.2%
Protein-coding genes
24
Proteins
24

Identifiers

WGS accession
RDPX01
BioProject
PRJNA494059

Reference

Reference
Publisher Correction: Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution [link]

Other Cubozoa species

Alatina alataMorbakka virulentaTripedalia maipoensisAlatinidae sp. Z8VKAUB7J3Carybdea cf. marsupialis auct. non (Linnaeus, 1758)Chironex yamaguchiiTamoya ohboya
See all Cubozoa species in the coverage matrix →

Availability shown here is recomputed from the live database every hour (last built 2026-09-24 08:01). If a data type is listed as unavailable for Morbakka virulenta, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

TOP