Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF13893 across 1 genomes (restricted to HOLIG) · 59 ms.

Species with hits:← all species HOLIG 5

Species	Gene ID	Pfam term	Match	Source	Browser
HOLIG	HOLI02050.G55717	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
HOLIG	HOLI01532.G44618	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
HOLIG	HOLI02797.G8310	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
HOLIG	HOLI00983.G44686	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse
HOLIG	HOLI00983.G44686	PF13893	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	Interproscan	JBrowse