Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 2 gene–annotation pairs matching PF16693 across 148 genomes · 17 ms.

Species with hits:Aurelia aurita complex sp. Pacific 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1004.g11.t1PF16693Inner membrane component of T3SS, periplasmic domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022954.1PF16693Inner membrane component of T3SS, periplasmic domainInterproscanJBrowse

TOP