Gene detail

Detailed information of Aala_g1921.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: XP_030840987.1, uncharacterized protein LOC115923799 [Strongylocentrotus purpuratus]
Species abbreviation AALAT · all data for this species · gene families

Sequence

Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P98060	Zinc metalloproteinase dpy-31 OS=Caenorhabditis elegans OX=6239 GN=dpy-31 PE=1 SV=2
A8Q2D1	Zinc metalloproteinase dpy-31 OS=Brugia malayi OX=6279 GN=dpy-31 PE=1 SV=2
D5FM34	Zinc metalloproteinase dpy-31 OS=Haemonchus contortus OX=6289 GN=dpy-31 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000005 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000031 (this species only)
Orthogroup (gene family)	OG0000046 (this species only)
Orthogroup (gene family)	OG0000239 (this species only)
Orthogroup (gene family)	OG0000833 (this species only)
Orthogroup (gene family)	OG0000951 (this species only)
Orthogroup (gene family)	OG0001217 (this species only)
Orthogroup (gene family)	OG0002783 (this species only)
Orthogroup (gene family)	OG0007009 (this species only)
Orthogroup (gene family)	OG0017617 (this species only)
Orthogroup (gene family)	OG0022877 (this species only)
Orthogroup (gene family)	OG0024049 (this species only)
Orthogroup (gene family)	OG0025346 (this species only)
Orthogroup (gene family)	OG0029059 (this species only)
Orthogroup (gene family)	OG0057133 (this species only)
Orthogroup (gene family)	OG0073806 (this species only)
Orthogroup (gene family)	OG0074428 (this species only)
Orthogroup (gene family)	OG0134161 (this species only)
Orthogroup (gene family)	OG0136320 (this species only)
Orthogroup (gene family)	OG0142584 (this species only)
Orthogroup (gene family)	OG0144647 (this species only)
Orthogroup (gene family)	OG0148669 (this species only)
Orthogroup (gene family)	OG0151355 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14291 all species →	DUF4371	Domain of unknown function (DUF4371)	Family	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF00575 all species →	S1	S1 RNA binding domain	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF01853 all species →	MOZ_SAS	MOZ/SAS family	Family	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13843 all species →	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006580 all species →	Domain	Zinc finger, TTF-type	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR025398 all species →	Domain	Domain of unknown function DUF4371	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan
IPR003029 all species →	Domain	S1 domain	Interproscan
IPR011488 all species →	Family	Translation initiation factor 2, alpha subunit	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR044126 all species →	Domain	IF2a, S1-like domain	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR027124 all species →	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR002717 all species →	Domain	Histone acetyltransferase domain, MYST-type	Interproscan
IPR050603 all species →	Family	MYST family histone acetyltransferases	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR029526 all species →	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR052638 all species →	Family	PiggyBac transposable element-derived	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45749 all species →	-	Interproscan
PTHR10127 all species →	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR10602 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1	Interproscan
PTHR23227 all species →	BUCENTAUR RELATED	Interproscan
PTHR10615 all species →	HISTONE ACETYLTRANSFERASE	Interproscan
PTHR10024 all species →	SYNAPTOTAGMIN	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR35450 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47055 all species →	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005850 all species →	Cellular Component	eukaryotic translation initiation factor 2 complex	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0033290 all species →	Cellular Component	eukaryotic 48S preinitiation complex	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0004402 all species →	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0001786 all species →	Molecular Function	phosphatidylserine binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005544 all species →	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0014059 all species →	Biological Process	regulation of dopamine secretion	Interproscan
GO:0017156 all species →	Biological Process	calcium-ion regulated exocytosis	Interproscan
GO:0017158 all species →	Biological Process	regulation of calcium ion-dependent exocytosis	Interproscan
GO:0030276 all species →	Molecular Function	clathrin binding	Interproscan
GO:0070382 all species →	Cellular Component	exocytic vesicle	Interproscan
GO:0071277 all species →	Biological Process	cellular response to calcium ion	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24272	DENR, TMA22; density-regulated protein	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.