Detailed information of Aala_g2016.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: MCH9665805.1, hypothetical protein [Gammaproteobacteria bacterium]
Species Alatina alata · all data for this species · gene families

 Sequence
Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6PWV5AT-rich interactive domain-containing protein 3C OS=Mus musculus OX=10090 GN=Arid3c PE=2 SV=2
A6NKF2AT-rich interactive domain-containing protein 3C OS=Homo sapiens OX=9606 GN=ARID3C PE=1 SV=1
Q05118Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000027 (this species only)
Orthogroup (gene family)OG0000034 (this species only)
Orthogroup (gene family)OG0000472 (this species only)
Orthogroup (gene family)OG0000493 (this species only)
Orthogroup (gene family)OG0002279 (this species only)
Orthogroup (gene family)OG0004823 (this species only)
Orthogroup (gene family)OG0009103 (this species only)
Orthogroup (gene family)OG0012306 (this species only)
Orthogroup (gene family)OG0012908 (this species only)
Orthogroup (gene family)OG0024071 (this species only)
Orthogroup (gene family)OG0031735 (this species only)
Orthogroup (gene family)OG0031848 (this species only)
Orthogroup (gene family)OG0074788 (this species only)
Orthogroup (gene family)OG0075049 (this species only)
Orthogroup (gene family)OG0128421 (this species only)
Orthogroup (gene family)OG0130780 (this species only)
Orthogroup (gene family)OG0135088 (this species only)
Orthogroup (gene family)OG0136860 (this species only)
Orthogroup (gene family)OG0138866 (this species only)
Orthogroup (gene family)OG0146824 (this species only)
Orthogroup (gene family)OG0148300 (this species only)
Orthogroup (gene family)OG0149308 (this species only)
Orthogroup (gene family)OG0149645 (this species only)
Orthogroup (gene family)OG0150548 (this species only)
Transcription factor familyzf-C2H2 · all TF in this species
Transcription factor familyARID · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388
all species →		ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF00005
all species →		ABC_tranABC transporterDomainInterproscan
PF14291
all species →		DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08344
all species →		TRP_2Transient receptor ion channel IIFamilyInterproscan
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036431
all species →		Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR001606
all species →		DomainARID DNA-binding domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050173
all species →		FamilyATP-binding cassette transporter CInterproscan
IPR003439
all species →		DomainABC transporter-like, ATP-binding domainInterproscan
IPR026630
all species →		FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR025398
all species →		DomainDomain of unknown function DUF4371Interproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013555
all species →		DomainTransient receptor ion channel domainInterproscan
IPR002153
all species →		FamilyTransient receptor potential channel, canonicalInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24223
all species →		ATP-BINDING CASSETTE SUB-FAMILY CInterproscan
PTHR45913
all species →		EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47027
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10117
all species →		TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042626
all species →		Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0015279
all species →		Molecular Functionstore-operated calcium channel activityInterproscan
GO:0034703
all species →		Cellular Componentcation channel complexInterproscan
GO:0051480
all species →		Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679
all species →		Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02916RP-L35, MRPL35, rpmI; large subunit ribosomal protein L35-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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