Genomic Location: not available for this species
NR annotation: KAJ7369458.1, Dynein heavy chain 14 [Desmophyllum pertusum]
Species Alatina alata · all data for this species · gene families
| UniProt accession | Description |
|---|---|
| Q63164 | Dynein axonemal heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dnah1 PE=2 SV=2 |
| E9Q8T7 | Dynein axonemal heavy chain 1 OS=Mus musculus OX=10090 GN=Dnah1 PE=1 SV=1 |
| P0C6F1 | Dynein axonemal heavy chain 2 OS=Mus musculus OX=10090 GN=Dnah2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000003 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000005 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000035 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000055 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000109 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000139 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000648 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0003200 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0004438 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0006318 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0007812 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18199 all species → | Dynein_C | Dynein heavy chain C-terminal domain | Domain | Interproscan |
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF15630 all species → | CENP-S | CENP-S protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR001969 all species → | Active_site | Aspartic peptidase, active site | Interproscan |
| IPR021109 all species → | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR027659 all species → | Family | Beta-sarcoglycan | Interproscan |
| IPR043160 all species → | Homologous_superfamily | Dynein heavy chain, C-terminal domain, barrel region | Interproscan |
| IPR041228 all species → | Domain | Dynein heavy chain, C-terminal domain | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR009072 all species → | Homologous_superfamily | Histone-fold | Interproscan |
| IPR029003 all species → | Family | CENP-S/Mhf1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47018 all species → | CXC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| PTHR47027 all species → | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR33198 all species → | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| PTHR21142 all species → | SARCOGLYCANS | Interproscan |
| PTHR35711 all species → | EXPRESSED PROTEIN | Interproscan |
| PTHR21301 all species → | REVERSE TRANSCRIPTASE | Interproscan |
| PTHR22878 all species → | UNCHARACTERIZED | Interproscan |
| PTHR22980 all species → | CORTISTATIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004190 all species → | Molecular Function | aspartic-type endopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0007517 all species → | Biological Process | muscle organ development | Interproscan |
| GO:0016012 all species → | Cellular Component | sarcoglycan complex | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0042383 all species → | Cellular Component | sarcolemma | Interproscan |
| GO:0046982 all species → | Molecular Function | protein heterodimerization activity | Interproscan |
| GO:0000712 all species → | Biological Process | resolution of meiotic recombination intermediates | Interproscan |
| GO:0003682 all species → | Molecular Function | chromatin binding | Interproscan |
| GO:0031297 all species → | Biological Process | replication fork processing | Interproscan |
| GO:0071821 all species → | Cellular Component | FANCM-MHF complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02114 | ATPF1E, atpC; F-type H+-transporting ATPase subunit epsilon | - | Photosynthesis proteins | ko00194 | deepkoala |
| K13784 | PTMA; prothymosin alpha | - | Others | - | deepkoala |
Genes whose expression across the transcriptome samples of Alatina alata tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Alatina alata, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | sequence table not available | – |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | sequence table not available | – |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
