Gene detail

Detailed information of Aala_g455.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: XP_022806436.1, uncharacterized protein LOC111343511 [Stylophora pistillata]
Species Alatina alata · all data for this species · gene families

Sequence

Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B5YDR3	Ribosomal protein L11 methyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=prmA PE=3 SV=1
A4XKA6	Ribosomal protein L11 methyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=prmA PE=3 SV=1
A6LJG3	Ribosomal protein L11 methyltransferase OS=Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) OX=391009 GN=prmA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000028 (this species only)
Orthogroup (gene family)	OG0000062 (this species only)
Orthogroup (gene family)	OG0000114 (this species only)
Orthogroup (gene family)	OG0000437 (this species only)
Orthogroup (gene family)	OG0000452 (this species only)
Orthogroup (gene family)	OG0001736 (this species only)
Orthogroup (gene family)	OG0005088 (this species only)
Orthogroup (gene family)	OG0008035 (this species only)
Orthogroup (gene family)	OG0011815 (this species only)
Orthogroup (gene family)	OG0012908 (this species only)
Orthogroup (gene family)	OG0014735 (this species only)
Orthogroup (gene family)	OG0015240 (this species only)
Orthogroup (gene family)	OG0019641 (this species only)
Orthogroup (gene family)	OG0029048 (this species only)
Orthogroup (gene family)	OG0056988 (this species only)
Orthogroup (gene family)	OG0074430 (this species only)
Orthogroup (gene family)	OG0075092 (this species only)
Orthogroup (gene family)	OG0128437 (this species only)
Orthogroup (gene family)	OG0130254 (this species only)
Orthogroup (gene family)	OG0130832 (this species only)
Orthogroup (gene family)	OG0133835 (this species only)
Orthogroup (gene family)	OG0137021 (this species only)
Orthogroup (gene family)	OG0141814 (this species only)
Orthogroup (gene family)	OG0148946 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04547 all species →	Anoctamin	Calcium-activated chloride channel	Family	Interproscan
PF07986 all species →	TBCC	Tubulin binding cofactor C	Domain	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan
PF13359 all species →	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF13847 all species →	Methyltransf_31	Methyltransferase domain	Domain	Interproscan
PF05699 all species →	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049452 all species →	Domain	Anoctamin, transmembrane domain	Interproscan
IPR012945 all species →	Domain	Tubulin binding cofactor C-like domain	Interproscan
IPR016098 all species →	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR006599 all species →	Domain	CARP motif	Interproscan
IPR027684 all species →	Family	Tubulin-specific chaperone C	Interproscan
IPR017901 all species →	Domain	C-CAP/cofactor C-like domain	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR044986 all species →	Family	Kinesin-like protein KIF15/KIN-12	Interproscan
IPR027806 all species →	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR052160 all species →	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR043203 all species →	Family	Voltage-gated cation channel calcium and sodium	Interproscan
IPR025714 all species →	Domain	Methyltransferase domain	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR008906 all species →	Domain	HAT, C-terminal dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15139 all species →	TUBULIN FOLDING COFACTOR C	Interproscan
PTHR37739 all species →	KINESIN-LIKE PROTEIN KIN-12D	Interproscan
PTHR21301 all species →	REVERSE TRANSCRIPTASE	Interproscan
PTHR34615 all species →	PX DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47266 all species →	ENDONUCLEASE-RELATED	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10037 all species →	VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM	Interproscan
PTHR43464 all species →	METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0007021 all species →	Biological Process	tubulin complex assembly	Interproscan
GO:0007023 all species →	Biological Process	post-chaperonin tubulin folding pathway	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0001518 all species →	Cellular Component	voltage-gated sodium channel complex	Interproscan
GO:0005248 all species →	Molecular Function	voltage-gated sodium channel activity	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0019228 all species →	Biological Process	neuronal action potential	Interproscan
GO:0035725 all species →	Biological Process	sodium ion transmembrane transport	Interproscan
GO:0086010 all species →	Biological Process	membrane depolarization during action potential	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Aala_g455.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.