Genomic Location: not available for this species
NR annotation: XP_047144340.1, myosin-10 [Hydra vulgaris]
Species Alatina alata · all data for this species · gene families
| UniProt accession | Description |
|---|---|
| Q99323 | Myosin heavy chain, non-muscle OS=Drosophila melanogaster OX=7227 GN=zip PE=1 SV=2 |
| P35579 | Myosin-9 OS=Homo sapiens OX=9606 GN=MYH9 PE=1 SV=4 |
| Q258K2 | Myosin-9 OS=Canis lupus familiaris OX=9615 GN=MYH9 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000005 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000410 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0001260 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0001471 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0001474 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0003230 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0004427 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0005300 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0013697 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0016020 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0019718 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00063 all species → | Myosin_head | Myosin head (motor domain) | Domain | Interproscan |
| PF03372 all species → | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF05699 all species → | Dimer_Tnp_hAT | hAT family C-terminal dimerisation region | Domain | Interproscan |
| PF21049 all species → | CFA69_ARM_rpt | Cilia- and flagella-associated protein 69, ARM repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036961 all species → | Homologous_superfamily | Kinesin motor domain superfamily | Interproscan |
| IPR001609 all species → | Domain | Myosin head, motor domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR023578 all species → | Homologous_superfamily | Ras guanine nucleotide exchange factor domain superfamily | Interproscan |
| IPR036964 all species → | Homologous_superfamily | Ras guanine-nucleotide exchange factor, catalytic domain superfamily | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR036691 all species → | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR005135 all species → | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR027124 all species → | Family | SWR1-complex protein 5/Craniofacial development protein 1/2 | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR052958 all species → | Family | Interferon-induced PKR regulator | Interproscan |
| IPR008906 all species → | Domain | HAT, C-terminal dimerisation domain | Interproscan |
| IPR048732 all species → | Family | Cilia- and flagella-associated protein 69 | Interproscan |
| IPR048733 all species → | Domain | Cilia- and flagella-associated protein 69, ARM repeats domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21301 all species → | REVERSE TRANSCRIPTASE | Interproscan |
| PTHR13140 all species → | MYOSIN | Interproscan |
| PTHR46114 all species → | APPLE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR23227 all species → | BUCENTAUR RELATED | Interproscan |
| PTHR46289 all species → | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED | Interproscan |
| PTHR14716 all species → | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003774 all species → | Molecular Function | cytoskeletal motor activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0016459 all species → | Cellular Component | myosin complex | Interproscan |
| GO:0000146 all species → | Molecular Function | microfilament motor activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0007015 all species → | Biological Process | actin filament organization | Interproscan |
| GO:0015629 all species → | Cellular Component | actin cytoskeleton | Interproscan |
| GO:0030050 all species → | Biological Process | vesicle transport along actin filament | Interproscan |
| GO:0031982 all species → | Cellular Component | vesicle | Interproscan |
| GO:0051015 all species → | Molecular Function | actin filament binding | Interproscan |
| GO:0005085 all species → | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
| GO:0007264 all species → | Biological Process | small GTPase-mediated signal transduction | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006338 all species → | Biological Process | chromatin remodeling | Interproscan |
| GO:0046983 all species → | Molecular Function | protein dimerization activity | Interproscan |
| GO:0097225 all species → | Cellular Component | sperm midpiece | Interproscan |
| GO:0097730 all species → | Cellular Component | non-motile cilium | Interproscan |
| GO:1902093 all species → | Biological Process | positive regulation of flagellated sperm motility | Interproscan |
Aala_g739.t1.Genes whose expression across the transcriptome samples of Alatina alata tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Alatina alata, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | sequence table not available | – |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | sequence table not available | – |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
