Gene detail

Detailed information of Aala_g751.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: KAI0209297.1, Zinc finger MYM-type protein 6, partial [Lamellibrachia satsuma]
Species Alatina alata · all data for this species · gene families

Sequence

Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P56698	Probable voltage-dependent N-type calcium channel subunit alpha-1B OS=Diplobatis ommata OX=1870830 PE=2 SV=1
O55017	Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus musculus OX=10090 GN=Cacna1b PE=1 SV=1
Q05152	Voltage-dependent N-type calcium channel subunit alpha-1B OS=Oryctolagus cuniculus OX=9986 GN=CACNA1B PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000004 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000035 (this species only)
Orthogroup (gene family)	OG0000054 (this species only)
Orthogroup (gene family)	OG0000164 (this species only)
Orthogroup (gene family)	OG0000399 (this species only)
Orthogroup (gene family)	OG0000411 (this species only)
Orthogroup (gene family)	OG0000502 (this species only)
Orthogroup (gene family)	OG0000604 (this species only)
Orthogroup (gene family)	OG0000669 (this species only)
Orthogroup (gene family)	OG0002987 (this species only)
Orthogroup (gene family)	OG0012068 (this species only)
Orthogroup (gene family)	OG0018540 (this species only)
Orthogroup (gene family)	OG0024069 (this species only)
Orthogroup (gene family)	OG0128087 (this species only)
Orthogroup (gene family)	OG0129656 (this species only)
Orthogroup (gene family)	OG0134905 (this species only)
Orthogroup (gene family)	OG0136866 (this species only)
Orthogroup (gene family)	OG0137505 (this species only)
Orthogroup (gene family)	OG0138442 (this species only)
Orthogroup (gene family)	OG0141143 (this species only)
Orthogroup (gene family)	OG0142010 (this species only)
Orthogroup (gene family)	OG0144735 (this species only)
Orthogroup (gene family)	OG0147302 (this species only)
Orthogroup (gene family)	OG0150715 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13843 all species →	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF13802 all species →	Gal_mutarotas_2	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF16905 all species →	GPHH	Voltage-dependent L-type calcium channel, IQ-associated	Family	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013519 all species →	Repeat	Integrin alpha beta-propellor	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR029526 all species →	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR052638 all species →	Family	PiggyBac transposable element-derived	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR025887 all species →	Domain	Glycoside hydrolase family 31, N-terminal domain	Interproscan
IPR026630 all species →	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR027124 all species →	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR050599 all species →	Family	Voltage-dependent calcium channel alpha-1 subunit	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR031649 all species →	Domain	Voltage-dependent L-type calcium channel, IQ-associated domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23220 all species →	INTEGRIN ALPHA	Interproscan
PTHR47055 all species →	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45913 all species →	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR23227 all species →	BUCENTAUR RELATED	Interproscan
PTHR45628 all species →	VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1	Interproscan
PTHR21301 all species →	REVERSE TRANSCRIPTASE	Interproscan
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan
PTHR37162 all species →	HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005178 all species →	Molecular Function	integrin binding	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan
GO:0007229 all species →	Biological Process	integrin-mediated signaling pathway	Interproscan
GO:0008305 all species →	Cellular Component	integrin complex	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0033627 all species →	Biological Process	cell adhesion mediated by integrin	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005891 all species →	Cellular Component	voltage-gated calcium channel complex	Interproscan
GO:0008331 all species →	Molecular Function	high voltage-gated calcium channel activity	Interproscan
GO:0098703 all species →	Biological Process	calcium ion import across plasma membrane	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Aala_g751.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.