Detailed information of Aala_g764.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: MCT5353384.1, endonuclease/exonuclease/phosphatase family protein [Pseudomonas aeruginosa]
Species abbreviation AALAT · all data for this species · gene families

 Sequence
Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000252 (this species only)
Orthogroup (gene family)OG0000338 (this species only)
Orthogroup (gene family)OG0000493 (this species only)
Orthogroup (gene family)OG0001353 (this species only)
Orthogroup (gene family)OG0002603 (this species only)
Orthogroup (gene family)OG0003890 (this species only)
Orthogroup (gene family)OG0007964 (this species only)
Orthogroup (gene family)OG0009213 (this species only)
Orthogroup (gene family)OG0010575 (this species only)
Orthogroup (gene family)OG0012952 (this species only)
Orthogroup (gene family)OG0018058 (this species only)
Orthogroup (gene family)OG0074490 (this species only)
Orthogroup (gene family)OG0074794 (this species only)
Orthogroup (gene family)OG0074875 (this species only)
Orthogroup (gene family)OG0129156 (this species only)
Orthogroup (gene family)OG0130209 (this species only)
Orthogroup (gene family)OG0133327 (this species only)
Orthogroup (gene family)OG0139227 (this species only)
Orthogroup (gene family)OG0140708 (this species only)
Orthogroup (gene family)OG0142345 (this species only)
Orthogroup (gene family)OG0146849 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699
all species →		Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13873
all species →		Myb_DNA-bind_5Myb/SANT-like DNA-binding domainDomainInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF14529
all species →		Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF13923
all species →		zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF08941
all species →		USP8_interactUSP8 interactingDomainInterproscan
PF04547
all species →		AnoctaminCalcium-activated chloride channelFamilyInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052958
all species →		FamilyInterferon-induced PKR regulatorInterproscan
IPR008906
all species →		DomainHAT, C-terminal dimerisation domainInterproscan
IPR028002
all species →		DomainMyb/SANT-like DNA-binding domain 5Interproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124
all species →		FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052560
all species →		FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR003613
all species →		DomainU-box domainInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037255
all species →		Homologous_superfamilyNRDP1, C-terminalInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR015036
all species →		DomainE3 ubiquitin-protein ligase NRDP1Interproscan
IPR049452
all species →		DomainAnoctamin, transmembrane domainInterproscan
IPR007632
all species →		FamilyAnoctaminInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46289
all species →		52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR47027
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227
all species →		BUCENTAUR RELATEDInterproscan
PTHR36688
all species →		ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10131
all species →		TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR46238
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12308
all species →		ANOCTAMINInterproscan
PTHR33332
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005254
all species →		Molecular Functionchloride channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:1902476
all species →		Biological Processchloride transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11299HMGN1; high-mobility group nucleosome-binding domain-containing protein 1-Chromosome and associated proteinsko03036deepkoala
K11981RNF41, NRDP1; E3 ubiquitin-protein ligase NRDP1EC:2.3.2.27
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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