Gene detail

Detailed information of Aala_g856.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: XP_012558730.2, potassium voltage-gated channel subfamily A member 2 [Hydra vulgaris]
Species abbreviation AALAT · all data for this species · gene families

Sequence

Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7T199	Potassium voltage-gated channel subfamily A member 10 OS=Gallus gallus OX=9031 GN=KCNA10 PE=2 SV=1
Q09470	Potassium voltage-gated channel subfamily A member 1 OS=Homo sapiens OX=9606 GN=KCNA1 PE=1 SV=2
P16388	Potassium voltage-gated channel subfamily A member 1 OS=Mus musculus OX=10090 GN=Kcna1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000015 (this species only)
Orthogroup (gene family)	OG0000114 (this species only)
Orthogroup (gene family)	OG0000129 (this species only)
Orthogroup (gene family)	OG0001217 (this species only)
Orthogroup (gene family)	OG0002059 (this species only)
Orthogroup (gene family)	OG0002252 (this species only)
Orthogroup (gene family)	OG0006067 (this species only)
Orthogroup (gene family)	OG0011175 (this species only)
Orthogroup (gene family)	OG0012192 (this species only)
Orthogroup (gene family)	OG0013613 (this species only)
Orthogroup (gene family)	OG0021910 (this species only)
Orthogroup (gene family)	OG0024040 (this species only)
Orthogroup (gene family)	OG0031724 (this species only)
Orthogroup (gene family)	OG0031770 (this species only)
Orthogroup (gene family)	OG0039914 (this species only)
Orthogroup (gene family)	OG0040015 (this species only)
Orthogroup (gene family)	OG0136257 (this species only)
Orthogroup (gene family)	OG0137954 (this species only)
Orthogroup (gene family)	OG0141195 (this species only)
Orthogroup (gene family)	OG0142355 (this species only)
Orthogroup (gene family)	OG0147596 (this species only)
Orthogroup (gene family)	OG0149359 (this species only)
Orthogroup (gene family)	OG0151282 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF02214 all species →	BTB_2	BTB/POZ domain	Domain	Interproscan
PF10515 all species →	APP_amyloid	Beta-amyloid precursor protein C-terminus	Family	Interproscan
PF00334 all species →	NDK	Nucleoside diphosphate kinase	Domain	Interproscan
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03283 all species →	PAE	Pectinacetylesterase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR003972 all species →	Family	Potassium channel, voltage dependent, Kv1	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR003968 all species →	Family	Potassium channel, voltage dependent, Kv	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR003131 all species →	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR008155 all species →	Family	Amyloidogenic glycoprotein	Interproscan
IPR019745 all species →	Conserved_site	Amyloidogenic glycoprotein, intracellular domain, conserved site	Interproscan
IPR019543 all species →	Domain	Beta-amyloid precursor protein C-terminal	Interproscan
IPR023005 all species →	Active_site	Nucleoside diphosphate kinase, active site	Interproscan
IPR036850 all species →	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan
IPR034907 all species →	Domain	Nucleoside diphosphate kinase-like domain	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR004963 all species →	Family	Pectinacetylesterase/NOTUM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46238 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR47018 all species →	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR11537 all species →	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan
PTHR23103 all species →	ALZHEIMER'S DISEASE BETA-AMYLOID RELATED	Interproscan
PTHR46161 all species →	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan
PTHR45774 all species →	BTB/POZ DOMAIN-CONTAINING	Interproscan
PTHR35450 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21562 all species →	NOTUM-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan
GO:0008076 all species →	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0005251 all species →	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0022008 all species →	Biological Process	neurogenesis	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04874	KCNA1, KV1.1; potassium voltage-gated channel Shaker-related subfamily A member 1	-	Ion channels	ko04040	deepkoala
K10523	SPOP; speckle-type POZ protein	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.