Gene detail

Detailed information of Aala_g862.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: XP_047128223.1, mitochondrial potassium channel ATP-binding subunit [Hydra vulgaris]
Species Alatina alata · all data for this species · gene families

Sequence

Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2GUP8	Mitochondrial potassium channel ATP-binding subunit OS=Xenopus tropicalis OX=8364 GN=abcb8 PE=2 SV=1
Q56A55	Mitochondrial potassium channel ATP-binding subunit OS=Danio rerio OX=7955 GN=abcb8 PE=2 SV=2
Q9CXJ4	Mitochondrial potassium channel ATP-binding subunit OS=Mus musculus OX=10090 GN=Abcb8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000022 (this species only)
Orthogroup (gene family)	OG0000035 (this species only)
Orthogroup (gene family)	OG0000038 (this species only)
Orthogroup (gene family)	OG0000050 (this species only)
Orthogroup (gene family)	OG0000055 (this species only)
Orthogroup (gene family)	OG0000220 (this species only)
Orthogroup (gene family)	OG0000672 (this species only)
Orthogroup (gene family)	OG0001359 (this species only)
Orthogroup (gene family)	OG0001443 (this species only)
Orthogroup (gene family)	OG0002876 (this species only)
Orthogroup (gene family)	OG0003975 (this species only)
Orthogroup (gene family)	OG0005427 (this species only)
Orthogroup (gene family)	OG0005603 (this species only)
Orthogroup (gene family)	OG0007399 (this species only)
Orthogroup (gene family)	OG0010372 (this species only)
Orthogroup (gene family)	OG0014604 (this species only)
Orthogroup (gene family)	OG0035008 (this species only)
Orthogroup (gene family)	OG0046469 (this species only)
Orthogroup (gene family)	OG0056914 (this species only)
Orthogroup (gene family)	OG0074835 (this species only)
Orthogroup (gene family)	OG0132450 (this species only)
Orthogroup (gene family)	OG0136333 (this species only)
Orthogroup (gene family)	OG0139391 (this species only)
Orthogroup (gene family)	OG0145120 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07727 all species →	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF14008 all species →	Metallophos_C	Iron/zinc purple acid phosphatase-like protein C	Domain	Interproscan
PF17675 all species →	APG6_N	Apg6 coiled-coil region	Coiled-coil	Interproscan
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF17917 all species →	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013103 all species →	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR025733 all species →	Domain	Iron/zinc purple acid phosphatase-like C-terminal domain	Interproscan
IPR041691 all species →	Domain	Atg6/beclin, coiled-coil domain	Interproscan
IPR007243 all species →	Family	Atg6/Beclin	Interproscan
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041373 all species →	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR039421 all species →	Family	Type 1 protein exporter	Interproscan
IPR039938 all species →	Family	Transcription factor Sp4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22930 all species →	UNCHARACTERIZED	Interproscan
PTHR45778 all species →	PURPLE ACID PHOSPHATASE-RELATED	Interproscan
PTHR12768 all species →	BECLIN 1	Interproscan
PTHR33198 all species →	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR46238 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24221 all species →	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan
PTHR21301 all species →	REVERSE TRANSCRIPTASE	Interproscan
PTHR34072 all species →	ENZYMATIC POLYPROTEIN-RELATED	Interproscan
PTHR14947 all species →	ZINC FINGER PROTEIN	Interproscan
PTHR23346 all species →	TRANSLATIONAL ACTIVATOR GCN1-RELATED	Interproscan
PTHR46866 all species →	GH12955P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0000407 all species →	Cellular Component	phagophore assembly site	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0006995 all species →	Biological Process	cellular response to nitrogen starvation	Interproscan
GO:0034271 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type I	Interproscan
GO:0034272 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type II	Interproscan
GO:0045324 all species →	Biological Process	late endosome to vacuole transport	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Aala_g862.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.