Detailed information of Aala_g870.t1 in Alatina alata

Genomic Location: not available for this species
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]
Species abbreviation AALAT · all data for this species · gene families

 Sequence
Sequence data are not available for Alatina alata.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000005 (this species only)
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000072 (this species only)
Orthogroup (gene family)OG0000102 (this species only)
Orthogroup (gene family)OG0000928 (this species only)
Orthogroup (gene family)OG0001720 (this species only)
Orthogroup (gene family)OG0001869 (this species only)
Orthogroup (gene family)OG0005117 (this species only)
Orthogroup (gene family)OG0010889 (this species only)
Orthogroup (gene family)OG0013368 (this species only)
Orthogroup (gene family)OG0014175 (this species only)
Orthogroup (gene family)OG0021012 (this species only)
Orthogroup (gene family)OG0056972 (this species only)
Orthogroup (gene family)OG0128458 (this species only)
Orthogroup (gene family)OG0132815 (this species only)
Orthogroup (gene family)OG0133855 (this species only)
Orthogroup (gene family)OG0135439 (this species only)
Orthogroup (gene family)OG0137027 (this species only)
Orthogroup (gene family)OG0138497 (this species only)
Orthogroup (gene family)OG0140201 (this species only)
Orthogroup (gene family)OG0141428 (this species only)
Orthogroup (gene family)OG0142142 (this species only)
Orthogroup (gene family)OG0142846 (this species only)
Orthogroup (gene family)OG0146987 (this species only)
Orthogroup (gene family)OG0151671 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21381
all species →
MCLN_ECDMucolipin, extracytosolic domainDomainInterproscan
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05181
all species →
XPA_CXPA protein C-terminusDomainInterproscan
PF01286
all species →
XPA_NXPA protein N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049134
all species →
DomainMucolipin, extracytosolic domainInterproscan
IPR050439
all species →
FamilyADAMTS and ADAMTS-likeInterproscan
IPR024079
all species →
Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR009061
all species →
Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR000465
all species →
FamilyXPA/RAD14Interproscan
IPR022652
all species →
Conserved_siteZinc finger, XPA-type, conserved siteInterproscan
IPR037129
all species →
Homologous_superfamilyXPA domain superfamilyInterproscan
IPR022656
all species →
DomainXPA, C-terminalInterproscan
IPR040247
all species →
FamilyProtein of unknown function DUF5524Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →
ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan
PTHR19446
all species →
REVERSE TRANSCRIPTASESInterproscan
PTHR47027
all species →
REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10142
all species →
DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLSInterproscan
PTHR31097
all species →
SI:DKEY-276J7.1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →
Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0030198
all species →
Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →
Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →
Molecular Functionmetallopeptidase activityInterproscan
GO:0003684
all species →
Molecular Functiondamaged DNA bindingInterproscan
GO:0006289
all species →
Biological Processnucleotide-excision repairInterproscan
GO:0000110
all species →
Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000715
all species →
Biological Processnucleotide-excision repair, DNA damage recognitionInterproscan
GO:0006284
all species →
Biological Processbase-excision repairInterproscan
GO:0033683
all species →
Biological Processobsolete nucleotide-excision repair, DNA incisionInterproscan
GO:0070914
all species →
Biological ProcessUV-damage excision repairInterproscan
GO:1901255
all species →
Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10847XPA; DNA-repair protein complementing XP-A cells-DNA repair and recombination proteinsko03400deepkoala
K10878SPO11; meiotic recombination protein SPO11-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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