Detailed information of BRAKERMNPP00000012355.1 in Nemopilema nomurai

Genomic Location: not available for this species
NR annotation: CAH3046040.1, unnamed protein product [Porites lobata]
Species abbreviation NNOMU · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZJ85U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1
O43395U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2
Q922U1U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005493 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01480
all species →
PWIPWI domainFamilyInterproscan
PF08572
all species →
PRP3pre-mRNA processing factor 3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002483
all species →
DomainPWI domainInterproscan
IPR027104
all species →
FamilyU4/U6 small nuclear ribonucleoprotein Prp3Interproscan
IPR013881
all species →
DomainPre-mRNA-splicing factor 3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14212
all species →
U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →
Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERMNPP00000012355.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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