Detailed information of Clavulariidae_g12153 in Trachythela sp. YZ-2020

Genomic Location: ctg000237:545595...566198
NR annotation: no NCBI-NR hit recorded
Species Trachythela sp. YZ-2020 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21123
all species →		Dna2_RiftDna2 Rift barrel domainDomainInterproscan
PF13086
all species →		AAA_11AAA domainDomainInterproscan
PF08696
all species →		Dna2DNA replication factor Dna2FamilyInterproscan
PF13087
all species →		AAA_12AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048459
all species →		DomainDNA2, rift barrel domainInterproscan
IPR041677
all species →		DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011604
all species →		Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR014808
all species →		DomainDNA replication factor Dna2, N-terminalInterproscan
IPR041679
all species →		DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR026851
all species →		DomainDNA replication ATP-dependent helicase/nuclease Dna2/JHS1, DEXXQ-box helicase domainInterproscan
IPR047187
all species →		DomainUpf1-like, C-terminal helicase domainInterproscan
IPR045055
all species →		FamilyDNA2/NAM7-like helicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →		DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004386
all species →		Molecular Functionhelicase activityInterproscan
GO:0017116
all species →		Molecular Functionsingle-stranded DNA helicase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0017108
all species →		Molecular Function5'-flap endonuclease activityInterproscan
GO:0071932
all species →		Biological Processreplication fork reversalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Clavulariidae_g12153.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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