Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | IDSSE_Tra_sp_1.0 |
|---|---|
| Assembly level | Contig |
| Assembled by | GCA_016169945.1 |
| Genome size | 551.4 |
| Scaffolds | 396 |
| Contigs | 396 |
| Scaffold N50 | 3563727 |
| Contig N50 | 3563727 |
| GC content | 37.5 |
| BUSCO | 90.10% |
| Protein-coding genes | 35,305 |
| Proteins | 35,305 |
| Chromosomes | - |
| WGS accession | JADLSH01 |
| BioProject | PRJNA661975 |
| Submitter | Institute of Deep-Sea Science and Engineering,Chinese Academy of Sciences |
| Year | 2020 |
| Reference | The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae) Genome Biology and Evolution [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 23:07). If a data type is listed as unavailable for Trachythela sp. YZ-2020, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
