Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | Corallium_rubrum_jaCorRubr1.2 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964265095.1 |
| Genome size | 507.65 |
| Scaffolds | 309 |
| Contigs | 857 |
| Scaffold N50 | 18521360 |
| Contig N50 | 1625182 |
| GC content | 38 |
| BUSCO | 86.40% |
| Protein-coding genes | 26,348 |
| Proteins | 34,548 |
| Chromosomes | 20 |
| WGS accession | CAXWAO01 |
| BioProject | PRJEB80373 |
| Submitter | Centro Nacional de Análisis Genómico |
| Year | 2024 |
| Reference | Correction to: Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change Genome Biology and Evolution [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 20:55). If a data type is listed as unavailable for Corallium rubrum, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
