Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | XeniaSp_v1 |
|---|---|
| Assembly level | Scaffold |
| Assembled by | GCF_021976095.1 |
| Genome size | 212.38 |
| Scaffolds | 168 |
| Contigs | 556 |
| Scaffold N50 | 14832246 |
| Contig N50 | 1122448 |
| GC content | 34.5 |
| BUSCO | 90.10% |
| Protein-coding genes | 18425 |
| Proteins | 26389 |
| Chromosomes | - |
| WGS accession | JAJSDR01 |
| BioProject | PRJNA548325 |
| Submitter | Carnegie Institution of Washington |
| Year | 2022 |
| Reference | Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia Nature [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 19:15). If a data type is listed as unavailable for Xenia sp. Carnegie-2017, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
