Which species have which data? The matrix below covers all 325 cnidarian species in CnidoSite × 15 data types. A green cell links straight to that module with the species already selected; a blank cell means the data type is genuinely not available for that species in this release. Click a species name to open its species portal, which lists every resource it has on one page.
Showing 39 species in Octocorallia (2026-09-17)
| Species | # | Genome | Gene models | Function | Gene family | RNA-seq | Co-expr. | Single-cell | Proteome | Epigenome | Metagenome | Phenotype | Paleo | Mitogenome | TE | JBrowse |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EVERR Eunicella verrucosa Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| HCOER Heliopora coerulea Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| PCLAV Paramuricea clavata Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| DGIGA Dendronephthya gigantea Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| ECAVO Eunicella cavolini Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| LSARM Leptogorgia sarmentosa Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| PPAPI Paragorgia papillata Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| CGRAC1 Callogorgia gracilis Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| HIMPE Hemicorallium imperiale Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| MMURI Muricea muricata Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| PGRIS Pteroeides griseum Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| CSP1 Chrysogorgia sp. JL179-B06 Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
| TSP Trachythela sp. YZ-2020 Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
| XSP Xenia sp. Carnegie-2017 Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
| Corallium_rubrum Corallium rubrum Octocorallia | 4 | ✓ | · | · | · | · | · | · | ✓ | · | · | ✓ | · | ✓ | · | · |
| Briareum_asbestinum Briareum asbestinum Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Cavernularia_obesa Cavernularia obesa Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Dichotella_gemmacea Dichotella gemmacea Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Erythropodium_caribaeorum Erythropodium caribaeorum Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax_marumi Phenganax marumi Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax_stokvisi Phenganax stokvisi Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax_subtilis Phenganax subtilis Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Stylatula_elongata Stylatula elongata Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| AAMER Antillogorgia americana Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea_clavigera Eunicea clavigera Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea_knighti Eunicea knighti Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea_succinea Eunicea succinea Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Gorgonia_ventalina Gorgonia ventalina Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Muricea_laxa Muricea laxa Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Nanipora_kamurai Nanipora kamurai Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Paramuricea_biscaya Paramuricea biscaya Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Pteroeides_caledonicum Pteroeides caledonicum Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Pterogorgia_guadalupensis Pterogorgia guadalupensis Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Renilla_koellikeri Renilla koellikeri Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Renilla_reniformis Renilla reniformis Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Sarcophyton_elegans Sarcophyton elegans Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Veretillum_cynomorium Veretillum cynomorium Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Virgularia_gustaviana Virgularia gustaviana Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Paracalyptrophora_sp_SY255_jin Paracalyptrophora sp. SY255-jin Octocorallia | 1 | ✓ | · | · | · | · | · | · | · | · | · | · | · | · | · | · |
Legend: ✓ = data available (click to open the module for that species) ·
· = not available in this release. The numbers behind this matrix are rebuilt from the
live database every hour; the same table is available as
tab-separated text
for scripted access.
Reading the first two columns. Genome assembly is set when the species has an assembly
record (size, scaffold/contig N50, BUSCO, accession) — all 325 species have one.
Gene models is set only when this database also carries the predicted gene set for that
assembly, which is true for 145 species. A row whose count (#) is 1
therefore means “the assembly is catalogued here, but it has not been annotated in CnidoSite”,
not “data are missing by mistake”.
