Callogorgia gracilis

Species code CGRAC1 · Class Octocorallia · NCBI Taxonomy 1309697
6 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

— not available

RNA-seq samples with expression values (TPM)

Co-expression network

— not available

Positive / negative co-expression edges

Single-cell

— not available

scRNA-seq datasets, cell atlas and marker genes

Proteome

— not available

Mass-spectrometry proteomics samples

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

— not available

Host-associated metagenomic samples

Phenotype

✓ 88 records

Trait measurements with geo-referencing

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Mitogenome

— not available

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly namejaCalGrac1.1
Assembly levelChromosome
Assembled byGCA_964204845.1
Genome size307.17
Scaffolds198
Contigs373
Scaffold N5020016955
Contig N503909000
GC content36.5
BUSCOC:96.1%[S:95.3%,D:0.8%],F:2.4%,M:1.5%
Protein-coding genes-
Proteins-
Chromosomes17
WGS accessionCAXNRF01
BioProjectPRJEB78395
SubmitterWELLCOME SANGER INSTITUTE
Year2024
Reference- - [link]

Other Octocorallia species

Availability shown here is recomputed from the live database every hour (last built 2026-09-17 22:18). If a data type is listed as unavailable for Callogorgia gracilis, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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