Genomic Location: ctg000046:5158238...5195337
NR annotation: no NCBI-NR hit recorded
Species Trachythela sp. YZ-2020 · all data for this species · gene families
| CDS |
| Clavulariidae_g2082 |
| Transcript |
| Clavulariidae_g2082 |
| Protein |
| Clavulariidae_g2082 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00780 all species → | CNH | CNH domain | Repeat | Interproscan |
| PF10366 all species → | Vps39_1 | Vacuolar sorting protein 39 domain 1 | Repeat | Interproscan |
| PF10607 all species → | CTLH | CTLH/CRA C-terminal to LisH motif domain | Domain | Interproscan |
| PF10367 all species → | Vps39_2 | Vacuolar sorting protein 39 domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011047 all species → | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| IPR001180 all species → | Domain | Citron homology (CNH) domain | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR019452 all species → | Domain | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 | Interproscan |
| IPR006594 all species → | Conserved_site | LIS1 homology motif | Interproscan |
| IPR006595 all species → | Domain | CTLH, C-terminal LisH motif | Interproscan |
| IPR000547 all species → | Repeat | Clathrin, heavy chain/VPS, 7-fold repeat | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR024964 all species → | Domain | CTLH/CRA C-terminal to LisH motif domain | Interproscan |
| IPR032914 all species → | Family | Vam6/VPS39/TRAP1 family | Interproscan |
| IPR019453 all species → | Domain | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12894 all species → | CNH DOMAIN CONTAINING | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0006886 all species → | Biological Process | intracellular protein transport | Interproscan |
| GO:0016192 all species → | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006914 all species → | Biological Process | autophagy | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0034058 all species → | Biological Process | endosomal vesicle fusion | Interproscan |
Clavulariidae_g2082.
