Detailed information of Clavulariidae_g23522 in Trachythela sp. YZ-2020

Genomic Location: ctg000539:10720777...10755401
NR annotation: no NCBI-NR hit recorded
Species Trachythela sp. YZ-2020 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19056
all species →		WD40_2WD40 repeated domainRepeatInterproscan
PF19057
all species →		PH_19PH domainDomainInterproscan
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039919
all species →		FamilyRho guanine nucleotide exchange factor 10/17Interproscan
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12877
all species →		RHO GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20689ARHGEF17; Rho guanine nucleotide exchange factor 17-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP