Detailed information of Cxam_g15680.t1 in Cassiopea xamachana

Genomic Location: not available for this species
NR annotation: XP_048581884.1, THO complex subunit 1 [Nematostella vectensis]
Species abbreviation CXAMA · all data for this species · gene families

 Sequence
Sequence data are not available for Cassiopea xamachana.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96FV9THO complex subunit 1 OS=Homo sapiens OX=9606 GN=THOC1 PE=1 SV=1
Q8R3N6THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1
Q7SYB2THO complex subunit 1 OS=Danio rerio OX=7955 GN=thoc1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005676 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11957
all species →		efThoc1THO complex subunit 1 transcription elongation factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021861
all species →		FamilyTHO complex, subunit THOC1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13265
all species →		THO COMPLEX SUBUNIT 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000445
all species →		Cellular ComponentTHO complex part of transcription export complexInterproscan
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan
GO:0032784
all species →		Biological Processregulation of DNA-templated transcription elongationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Cxam_g15680.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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