Detailed information of Cxam_g16523.t1 in Cassiopea xamachana

Genomic Location: not available for this species
NR annotation: XP_047129819.1, eukaryotic translation initiation factor 3 subunit F [Hydra vulgaris]
Species abbreviation CXAMA · all data for this species · gene families

 Sequence
Sequence data are not available for Cassiopea xamachana.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O00303Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1
Q4R5B8Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1
A5A6I3Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005948 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13012
all species →		MitMem_regMaintenance of mitochondrial structure and functionFamilyInterproscan
PF01398
all species →		JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027531
all species →		FamilyEukaryotic translation initiation factor 3 subunit FInterproscan
IPR024969
all species →		DomainEIF3F/CSN6-like, C-terminalInterproscan
IPR037518
all species →		DomainMPN domainInterproscan
IPR000555
all species →		DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10540
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0005852
all species →		Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413
all species →		Biological Processtranslational initiationInterproscan
GO:0031369
all species →		Molecular Functiontranslation initiation factor bindingInterproscan
GO:0071541
all species →		Cellular Componenteukaryotic translation initiation factor 3 complex, eIF3mInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008233
all species →		Molecular Functionpeptidase activityInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03249EIF3F; translation initiation factor 3 subunit F-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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