Detailed information of Cxam_g18268.t1 in Cassiopea xamachana

Genomic Location: not available for this species
NR annotation: XP_012554652.2, growth hormone-regulated TBC protein 1 [Hydra vulgaris]
Species abbreviation CXAMA · all data for this species · gene families

 Sequence
Sequence data are not available for Cassiopea xamachana.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PBU5Growth hormone-regulated TBC protein 1-A OS=Danio rerio OX=7955 GN=grtp1a PE=2 SV=1
Q5TC63Growth hormone-regulated TBC protein 1 OS=Homo sapiens OX=9606 GN=GRTP1 PE=1 SV=4
Q6GLZ0Growth hormone-regulated TBC protein 1 OS=Xenopus laevis OX=8355 GN=grtp1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005691 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050302
all species →		FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →		RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for Cxam_g18268.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19953GRTP1, TBC1D6, MSB3_4; TBC1 domain family member 6-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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