Detailed information of Cxam_g3294.t1 in Cassiopea xamachana

Genomic Location: not available for this species
NR annotation: CAH3140238.1, unnamed protein product [Porites lobata]
Species Cassiopea xamachana · all data for this species · gene families

 Sequence
Sequence data are not available for Cassiopea xamachana.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8TDG4Helicase POLQ-like OS=Homo sapiens OX=9606 GN=HELQ PE=1 SV=2
Q2VPA6Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2
A0FLQ6DNA polymerase theta OS=Caenorhabditis elegans OX=6239 GN=polq-1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002976 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21099
all species →		POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF14520
all species →		HHH_5Helix-hairpin-helix domainDomainInterproscan
PF20470
all species →		HTH_61Helix-turn-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048960
all species →		DomainPOLQ-like, helical domainInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR050474
all species →		FamilyHelicase Hel308/SKI2Interproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR046931
all species →		DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47961
all species →		DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for Cxam_g3294.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Cxam_g3294.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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