Detailed information of Cxam_g8293.t1 in Cassiopea xamachana

Genomic Location: not available for this species
NR annotation: XP_047141827.1, clathrin heavy chain 1 [Hydra vulgaris]
Species abbreviation CXAMA · all data for this species · gene families

 Sequence
Sequence data are not available for Cassiopea xamachana.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68FD5Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3
P49951Clathrin heavy chain 1 OS=Bos taurus OX=9913 GN=CLTC PE=1 SV=1
Q00610Clathrin heavy chain 1 OS=Homo sapiens OX=9606 GN=CLTC PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005110 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13838
all species →		Clathrin_H_linkClathrin-H-linkRepeatInterproscan
PF01394
all species →		Clathrin_propelClathrin propeller repeatRepeatInterproscan
PF00637
all species →		ClathrinRegion in Clathrin and VPSRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000547
all species →		RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR016025
all species →		Homologous_superfamilyClathrin heavy chain, N-terminalInterproscan
IPR016341
all species →		FamilyClathrin, heavy chainInterproscan
IPR012331
all species →		Homologous_superfamilyClathrin, heavy chain, linkerInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR022365
all species →		RepeatClathrin, heavy chain, propeller repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10292
all species →		CLATHRIN HEAVY CHAIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0030130
all species →		Cellular Componentclathrin coat of trans-Golgi network vesicleInterproscan
GO:0030132
all species →		Cellular Componentclathrin coat of coated pitInterproscan
GO:0032051
all species →		Molecular Functionclathrin light chain bindingInterproscan
GO:0071439
all species →		Cellular Componentclathrin complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006898
all species →		Biological Processreceptor-mediated endocytosisInterproscan
GO:0045334
all species →		Cellular Componentclathrin-coated endocytic vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04646CLTC; clathrin heavy chain-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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