Detailed information of ENSDKPP00000014489.1 in Plumapathes pennacea

Genomic Location: chr2:26846444...26853783
NR annotation: XP_031572959.1, U6 snRNA phosphodiesterase-like [Actinia tenebrosa]
Species Plumapathes pennacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91W78U6 snRNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1
Q5I0I5U6 snRNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1
Q0II50U6 snRNA phosphodiesterase 1 OS=Bos taurus OX=9913 GN=USB1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004005 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09749
all species →
HVSLUncharacterised conserved proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027521
all species →
FamilyU6 snRNA phosphodiesterase 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13522
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004518
all species →
Molecular Functionnuclease activityInterproscan
GO:0034477
all species →
Biological ProcessU6 snRNA 3'-end processingInterproscan
GO:0000175
all species →
Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDKPP00000014489.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP