Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | jaPluPenn1.1 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964036295.1 |
| Genome size | 276.59 |
| Scaffolds | 24 |
| Contigs | 110 |
| Scaffold N50 | 26556371 |
| Contig N50 | 8495953 |
| GC content | 40.5 |
| BUSCO | C:98.6%[S:97.4%,D:1.1%],F:0.9%,M:0.5% |
| Protein-coding genes | - |
| Proteins | - |
| Chromosomes | 12 |
| WGS accession | CAXIWU01 |
| BioProject | PRJEB75605 |
| Submitter | WELLCOME SANGER INSTITUTE |
| Year | 2024 |
| Reference | - - [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-18 02:53). If a data type is listed as unavailable for Plumapathes pennacea, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
