Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | jaEchHorr1.2 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964199735.2 |
| Genome size | 627.87 |
| Scaffolds | 884 |
| Contigs | 2695 |
| Scaffold N50 | 42565161 |
| Contig N50 | 570216 |
| GC content | 39.27 |
| BUSCO | C:99.2%[S:97.1%,D:2.0%],F:0.5%,M:0.4% |
| Protein-coding genes | 55832 |
| Proteins | 50984 |
| Chromosomes | 16 |
| WGS accession | CAXMZG02 |
| BioProject | PRJEB77564 |
| Submitter | WELLCOME SANGER INSTITUTE |
| Year | 2025 |
| Reference | Chromosome-level genomes of scleractinian corals: gene prediction and functional annotation Scientific Data [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 19:28). If a data type is listed as unavailable for Echinopora horrida, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
