Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
scRNA-seq datasets, cell atlas and marker genes
DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq
| Assembly name | Aiptasia genome 1.1 |
|---|---|
| Assembly level | Scaffold |
| Assembled by | GCA_001417965.1 |
| Genome size | 244.27 |
| Scaffolds | 4312 |
| Contigs | 29750 |
| Scaffold N50 | 442145 |
| Contig N50 | 14401 |
| GC content | 36.5 |
| BUSCO | C:94.9%[S:92.8%,D:2.1%],F:3.7%,M:1.4% |
| Protein-coding genes | 26042 |
| Proteins | 26789 |
| Chromosomes | - |
| WGS accession | LJWW01 |
| BioProject | PRJNA261862 |
| Submitter | KAUST |
| Year | 2015 |
| Reference | The genome of Aiptasia, a sea anemone model for coral symbiosis. Proceedings of the National Academy of Sciences of the United States of America [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 19:32). If a data type is listed as unavailable for Exaiptasia diaphana, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
