Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | crgOcupat |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_052425735.1 |
| Genome size | 504.89 |
| Scaffolds | 1951 |
| Contigs | 3502 |
| Scaffold N50 | 34344248 |
| Contig N50 | 838847 |
| GC content | 38.5 |
| BUSCO | C:99.4%[S:96.4%,D:3.0%],F:0.3%,M:0.2% |
| Protein-coding genes | 39482 |
| Proteins | 39482 |
| Chromosomes | 14 |
| WGS accession | JBPAPT01 |
| BioProject | PRJNA1270949 |
| Submitter | Centre for Genomic Regulation |
| Year | 2025 |
| Reference | The evolution of facultative symbiosis in stony corals Nature [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-18 02:51). If a data type is listed as unavailable for Oculina patagonica, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
