Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | jaMadSena2.1 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964656595.1 |
| Genome size | 516.64 |
| Scaffolds | 403 |
| Contigs | 1288 |
| Scaffold N50 | 38906063 |
| Contig N50 | 1018390 |
| GC content | 37.98 |
| BUSCO | C:99.6%[S:98.5%,D:1.1%],F:0.1%,M:0.3% |
| Protein-coding genes | 29214 |
| Proteins | 28213 |
| Chromosomes | 14 |
| WGS accession | CAZZSH01 |
| BioProject | PRJEB83562 |
| Submitter | WELLCOME SANGER INSTITUTE |
| Year | 2025 |
| Reference | Chromosome-level genomes of scleractinian corals: gene prediction and functional annotation Scientific Data [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 21:15). If a data type is listed as unavailable for Madracis senaria, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
