Acropora hyacinthus

Species code AHYAC · Class Hexacorallia · NCBI Taxonomy 55974
10 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

✓ 1 record

RNA-seq samples with expression values (TPM)

Co-expression network

✓ 2 records

Positive / negative co-expression edges

Single-cell

— not available

scRNA-seq datasets, cell atlas and marker genes

Proteome

— not available

Mass-spectrometry proteomics samples

Epigenome

✓ 8 records

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

— not available

Host-associated metagenomic samples

Phenotype

— not available

Trait measurements with geo-referencing

Paleobiology

✓ 1 record

Fossil occurrences and stratigraphic records

Mitogenome

✓ 19 records

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly nameAhya_1.0
Assembly levelScaffold
Assembled byGCA_014634145.1
Genome size426.48
Scaffolds154
Contigs19192
Scaffold N5035173190
Contig N5042794
GC content39.07
BUSCOC:97.6%[S:95.8%,D:1.8%],F:1.9%,M:0.4%
Protein-coding genes31100
Proteins28210
Chromosomes14
WGS accessionBLFG01
BioProjectPRJDB8519
SubmitterAtmosphere and Ocean Research Institute, The University of Tokyo
Year2020
ReferenceCorrigendum to: Eighteen Coral Genomes Reveal the Evolutionary Origin of Acropora Strategies to Accommodate Environmental Changes Molecular Biology and Evolution [link]

Other Hexacorallia species

Availability shown here is recomputed from the live database every hour (last built 2026-09-16 20:27). If a data type is listed as unavailable for Acropora hyacinthus, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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