Acropora millepora

Species code AMILL · Class Hexacorallia · NCBI Taxonomy 45264
11 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

✓ 1 record

RNA-seq samples with expression values (TPM)

Co-expression network

✓ 2 records

Positive / negative co-expression edges

Single-cell

✓ 2 records

scRNA-seq datasets, cell atlas and marker genes

Proteome

— not available

Mass-spectrometry proteomics samples

Epigenome

✓ 15 records

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

— not available

Host-associated metagenomic samples

Phenotype

— not available

Trait measurements with geo-referencing

Paleobiology

✓ 1 record

Fossil occurrences and stratigraphic records

Mitogenome

✓ 22 records

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly nameAmil_v2.1
Assembly levelChromosome
Assembled byGCF_013753865.1
Genome size453.36
Scaffolds854
Contigs1251
Scaffold N5019840543
Contig N501091365
GC content39
BUSCOC:98.8%[S:94.2%,D:4.5%],F:0.2%,M:1.0%
Protein-coding genes30136
Proteins42775
Chromosomes14
WGS accessionJACAWQ01
BioProjectPRJNA633778
SubmitterColumbia
Year2020
ReferencePopulation genetics of the coral Acropora millepora: Toward genomic prediction of bleaching Science [link]

Other Hexacorallia species

Availability shown here is recomputed from the live database every hour (last built 2026-09-16 16:10). If a data type is listed as unavailable for Acropora millepora, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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