Gene detail

Detailed information of ENSDKPP00000020748.1 in Plumapathes pennacea

Genomic Location: not available for this species
NR annotation: CAH3169428.1, unnamed protein product [Porites lobata]
Species abbreviation PPENN · all data for this species · gene families

Sequence

CDS

Transcript

ENSDKPT00000020748

TGGAAAATCATGGCGGCCGATTCGAAGTAAAACGAGCCGAAGCTCGAGTTTCTTTAAAAATCCTGGAGGGAGAGAAGATGAGGAGTAGCAGACTCAAGAACAAGGACACGTCTTGTGTTCTGTATACAGAAAGGACCATAAATGAAGTGCAGAAAATCCTCCGAGGTCGAATATTTCATGGAGACATGCCGTtgagtttgcatcatttggaAGATCAGAAAAGaCAAGTGCTTGACCTGATAAAGCGATGTGCAGAAGCTGGAGAAAGTAACTCAGTGTTGCTGATTGGTCCAAGAGGAAGTGGCAAGACTTTAGTACTAAATAGCGCCTTGGAGAATCTTCACAAAACTAGATCTGTGAAGCAAAATCTGTTAGaagttcatttgagtgGTTTGGTTCAAACTGATGACCGATCTGCATTACTTGAAATAACCAGGCAACTGCAACTAGAAAATACAGTGGGAGATAAAGTTTTTGGTTCATTTGCAGAAAACCTAGCTTTTCTATTGGATGCTCTCAAGAGTGGCAGTGAACAAAGTCAGTCAGTCCTGTTTGTCCTGGATGAGTTTGACTTGTTTGCTCATCACAAGAACCAAACCTTGTTGTACAACCTGTTTGATGTATCACAATCTGCACAGGCTCCCATCTGTGTCATTGGCTTGACATGTAGACTGGATGTTGTTGAACTTTTAGAGAAGAGAGTGAAGTCCAGATTCTCACATCGACAGATTCACATATTTAATTCTCAGAAATTTGAAGACTACCTAGAAATATTCAGGTCAGTTGTTTCTTTGCCCTCATCTTTCCATGATAAGAGTTTTAGCCAAGCTTGGCAAAAAAACATCAAGGACCTGCTGCAGGATGGCACTGTTCTAGATATATTGAAGAGACAATACAGCATTAGTAAAGACATTGCAAGCCTTCACAATCTTCTGACAATGCCAGTGTGTAATATTTCCGGTACACACCCCTTCATTCAAAGCGCAGACTTAATACAAGCAGACTCACAGAAGAAGTTGGATTGCAAGGCAGCAATGTTACATGAATATCAAAAGTTCACTCAAGGGAAAGGCCATGCAGCTCAGTCCTTTGAGAAGCCAGTTGTCTTGAAAGCCTTTGAACATTTGGTATCATTGGAGTTTGTGAAACCTTTAGATGGTTCAGTACGTCACACCCCTAAGGAGTTTCAGTTGGTGACACTCTTGGTGGACCCAAGTCAAGTCATGGACGCACTCCAGCAGTACCCTGACTGCCCTACGGAGGTCAAACATTGGGCAACAAGTATAGCTATTGTTTGACTCTACCATCTAACTATCAAAGGTTGATCTGGTTCAGCCTGACATTCTACAGGGATGCAAGGTGACAGTAAATACATTACTAAtttattacttgggctcacactAGCAGCAAAACCTAAGCTGGAGCCTTCTAAAAAGATATTGCAGTCCTATGTTTTTGCACTGATGAAAGACTAATGCTTGAAATGTCAGCCAACTCATTCCTTAAACAGTATATCCACAAAAATCTTACATTACCATTCATCTCTATGCTGATGCACTAGTTCTCACAGGAACTGCCGTAATCCACTGTAACCAGTAACATGTGGTTTTGTCTGACCTCTAACTGTGCATGTTGGTATTTGGGTTGAGATTGTGAAACAAAATGATTATTATGCATACATGCAAATCGTGCAGCACATTCTTATATTCCTAAGTTGATTATATGCCTTCTTTtcctttgaaaagaaaaacttatgCAGTGCCATTGAACCTTGCCCCTAGCACAATCAAATTGCATTGTTTTGACATGTGTAGCTTGTGTTTGCCCTTGCGCTTGATTTACtagtgtgaaccagccttcattttaaacaaaaattcaCAGTAACAGTTCTTTAAAGAATCACCACATTGAAAAGCCTTCCAAACTGCAGTGTGGGTGATATGTCTACAGAGGGGAACATTTGCAGAGGATTATATGCCAAATTGGTAATCACTATAACACAGTACAATGTtaaagtttcagtttttctgTGAGCATGCATAACATGAGATTCATGATAAACTATTTCTTggtgtagtagtagtattatGGAGATGTTCTCAAAAAAAATTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R6Z7	Origin recognition complex subunit 4 OS=Pongo abelii OX=9601 GN=ORC4 PE=2 SV=1
Q6P9Z8	Origin recognition complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Orc4 PE=2 SV=1
Q4U3P8	Origin recognition complex subunit 4 OS=Cricetulus griseus OX=10029 GN=ORC4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005912 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14629 all species →	ORC4_C	Origin recognition complex (ORC) subunit 4 C-terminus	Family	Interproscan
PF13191 all species →	AAA_16	AAA ATPase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032705 all species →	Domain	Origin recognition complex subunit 4, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR016527 all species →	Family	Origin recognition complex subunit 4	Interproscan
IPR041664 all species →	Domain	Orc1-like, AAA ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12087 all species →	ORIGIN RECOGNITION COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000808 all species →	Cellular Component	origin recognition complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0003688 all species →	Molecular Function	DNA replication origin binding	Interproscan
GO:0005664 all species →	Cellular Component	nuclear origin of replication recognition complex	Interproscan
GO:0006270 all species →	Biological Process	DNA replication initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02606	ORC4; origin recognition complex subunit 4	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.