Gene detail

Detailed information of ENSDKPP00000024660.1 in Plumapathes pennacea

Genomic Location: not available for this species
NR annotation: XP_031567506.1, cilia- and flagella-associated protein 52-like [Actinia tenebrosa]
Species Plumapathes pennacea · all data for this species · gene families

Sequence

CDS

Transcript

ENSDKPT00000024660

CTATTGGAAACGCGCGGTCCCGACAAAAATAAGTTGTCTGGTTTGACTGGGATTACACGAGCAATTTACCGATATTTCCCTGGTGTACTCAATTTGTGGACGAACTGAAAATGAGCGAAACCAAGGAGTCTTTGGATCTTGTTGCTACCATTGGCTTTGCAGGACAGGTCCCTGGTGGCTTACTGGTTCATCCAGACCGCCAGCACCTCATTTATCCCCTGGGAAGCATGGTTGTTATCGAAGATCTCGCAAGCAATAAGCAGGACTTGTTGTCGGATCACAAAAACGTATCGTGTGTTGCTGTCTCCAAGAGTGGGAAGTATCTTGCTTCTGGCGAAGAAACACACATGGGTTTTGATGCAGACGTTATATTATGGGACTACGAGAAGCGGGTGTTGATCAAGAGGTTCAAGTTACATAAAGTAAAAGTCGAAGCACTGGCCTTTTCTCCAAACGACCTCTATCTCATTTCTCTTGGGGGCCAAGATGATAGAAGTATTGTAGTGTGGAATCTGAAGACCATGGAGTCAATCTGTGGCAGTCCAGCAGCAGCTTTCAGTGCAGGGACAACCTATGCAGTGACATTTGCCAACAACTGTGATGATGTCTTTGTGACAGGTGGCAATAAGACCTTGCGAGTATGGCAGCTTGATTTGCCCAATCGCAAGATCCGCCCTACAGAGGTTAACATGGGACAGCTGAAGAGAATTGTCAAGTGCATTCAGATGGATGATAAAGATAACTACTTCTACTGTGGTACTACCACTGGGGATATTCTCCAGGTAAATGCCAAGACAAAGCTTCTGAAGGAGTATGGCCCAAACAAGGGGCTGTTGGGCCAAGGTGTGTTGTCACTGCAGTTTGTCAAGACTGGAGAAATCATAGCTGGTGCTGGTGATGGAACTGTGGCTATCATTAGTCATGCCAAGGACAAGTTTACTAAAACTCAAGTGGCCAAGGTTGATGGTGGTGTGTCATCCATAGCTTTGAGGGGCCAAGGACATCAGTTCTATGTAGGAACAGTATCATCGCAGATGTATAGGTTTGATTACGCCGAGTTCACACACGAGAGAATCAAGACCTGTCACCACAGCAAAGTCAACGACATCGTGTTCCCTTTTGCCTATTCCGACTGTTTTGCCACCTGTTCCAAAAGTGAGATACGTGTGTGGAACACAAGGACGAACAAGGAGCTATTGAGGATAAACGTCCCTAACATGACGTGCAATGCGATAGACTTCATGAGGAATGGCAAAAGTATAGTAAGCGCCTGGAATGATGGGAGAATCCGGGCCTTCACGCCTGAGTCAGGCTCACTTTTGTACGAAATCAACAATGCTCACACAATGGGCGTGACGGCGTTGGCGACGATGTCCGACTGCGAGCACATCATCagcgggggaggggagggacaAGTCCGTGTGTGGCGGATCACGCGAAATACTCAGAGTCTGTTGGAAACCATGAAGGAGCAACACAAGGGTGCTGTAACATGCATCAAAATCCGAAATGATGACAGTGCGTGTGTATCAGCAAGCACCGATGGCACCTGTATTATCTGGGATTTGACGCAATTTGTGAGGAACCAAATTGTTTTTGCCACCACAATGTTCAAGGCTGTGTGTTACTATCAACCTGATGAATGCCAGATCATTACCACTGGGGAAGATCGCAAAGTTGCTTACTGGGACCTAGCCGATGGCTCCCAAATTCGTGAACTTGAAGGTTCTAAATCAGGTTCTATTGAGGGTATGGACATCTCAGCTGATGAGCAGAACCATGTCAGCCTTGTGACGGGTGGTCAAGACAAACTCATCAAGGTGTGGGATTATGATGAGGGCGTGGTCACTCACATAGGCAAGGGTCACGGTGGTGATGTGACCAGGGTGAAGATCTGCCCTAACCGCGTCTGGATCGTCAGCGTAGGAGCTGATGGAGGTATCCTCAAATGGCGTTTCCCTCAAAGAACAAACAGGAATCAGGTCGACATTAAAGATGTTAGATACTAATCTTTAGTAATCCTTTCAAAGCCAAAGGCACACTTGACTCCAAGGATTTCTGagtccggttgttcaaagcagttGTAAGCTAACATCGAGCAAGTcggatttttttgtttttgtttttttgtttttgcattttttttgctttaaaaTGAGAAGCTTTTGCGCACAAGACGACTTTCCTTGCAGTGCTTCGATCAAAAACTTTATACTCACTCTTTGATCGAAACTCTCCAGTTCGTTTGCCAAAATTATTTGGTTAACTGtggattttagtttaatcgaacaaccgggcccaacTGTAAAACGAAATCCAAAGGTGTGTCCGCTCATTGAGTAAATTCTAATGGaaatgaaaggattaaaaTCGTGAAAGCTTGTCGATTTTACCAGGAATGAATAGGCGCATCGTTTTCCCAGCCTTTGTGGTGTTTTGGGAGCTCAGAAGTTGCATCTTGGTTTAAAATCCCAATTGGCTTTCCGCTTCAAAACGTTTGAAGGAGTATTATTTTAGAAGTAAGTGTTCAAAAGCTAAGGCCCAGGCTGCTGAACTGCAagttgctttttgttttccttaaTTGAGTATCGAATTTACTTAATTTTGGCTTTCCAGCTAACTTTTCACATACGAAAcatcattgttttttttttactattgTTGCAAGGCAAGCGACGTTTCTTAGAATAAACCATTTGTGACACATGTATATAGCAATCAAGCTTCCAAGTAACCCATCCTATTTCTTTCGGTTGTTTGGCGAGGAAAGTACACTTTCATTGCCAacatttttgtcttgtttgtACTGACATTTGCACAAGTCAAAAGTCTGCATTTAAGTGTCACTCCAAGTGAGATTCATGTCGCATTCAAGTGCTTTAATCTCTAAAGTTCAGAACGAAAATTGCGTCCACCGTTGGACATGTTAATCATGTACAAAACgtacaatattataatataacCTTTAGGAGTCGCATGTACAGGTAGCGAGTATGATCTACTACAgt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E1BKF9	Cilia- and flagella-associated protein 52 OS=Bos taurus OX=9913 GN=CFAP52 PE=1 SV=1
Q8N1V2	Cilia- and flagella-associated protein 52 OS=Homo sapiens OX=9606 GN=CFAP52 PE=1 SV=3
F1SS88	Cilia- and flagella-associated protein 52 OS=Sus scrofa OX=9823 GN=CFAP52 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004059 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21031 all species →	WDR54	WDR54	Repeat	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR050630 all species →	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan
IPR049546 all species →	Repeat	WD repeat-containing protein 54-like beta-propeller	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13720 all species →	WD-40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24728	CFAP52, WDR16; cilia- and flagella-associated protein 52	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.